Ingenuity Pathways Analysis
Ingenuity Pathways Analysis (IPA) site license is provided via a cost sharing effort between departments at Rutgers and UMDNJ.
This site license allows faculty, staff, and students to use the IPA cloud service and installs a web application on your desktop. Learn more about IPA at: http://www.ingenuity.com.
Getting An Account
To get started, request an account (based on your Rutgers email account) by sending email to oirt@rutgers.edu
On-Campus Training
The October 2, 2009 on-campus training sessions require that you have an account in advance, to register read further:
Basic SEMINAR Training
- To register, click HERE.---- 9:00am-9:30am Introduction to Ingenuity and IPA
---- 9:30am- 10:00am Use Case Study
---- 10:00am-10:15am Getting Started
---- 10:15am-10:30am Break
---- 10:30am-12:00pm Search & Pathway Building
---- Part 1: Introduction to Searching
---- Part 2: Introduction to Pathway Building
Intermediate HANDS-ON Training (only 18 computers)
- To register, click HERE.---- 1:00pm-3:30pm Dataset Analysis: Interpretation of Gene, Transcript, Protein and Metabolite Data
---- Part 1: Data Upload and Running an Analysis with Q&A and Hands-on Excercise
---- Part 2: Functional Analysis with Q&A and Hands-on Excercise
---- Part 3: Canonical Pathwayswith Q&A and Hands-on Excercise
---- Part 4: Networks with Q&A and Hands-on Excercise
---- 3:30pm-3:45pm Break
---- 3:45pm-4:30pm Advanced Training - Biomarker Analysis and Analysis of Lists
---- 4:30pm-5pm Ingenuity Open Lab
This training session allows attendees to bring their own datasets or scientific questions. Ingenuity scientist trainers will answer questions pertaining to attendees specific needs. If everyone in the group has the same question, the answers can be presented to all. If individuals have different workflows, questions, or scientific problems, the Ingenuity trainers will circulate around the room to provide individual attention. Ingenuity Open Lab is considered an Advanced Training Session, and participants should have already completed IPA Basic and Intermediate Training before attending.
Note that a more complete Syllabus is available on the Sakai site below or click HERE.
Building a User Community
In response to faculty requests, a mail list has been created to foster the growth of a Ingenuity User Community. If you are interested in joining, subscribe by logging in here. As the user community grows, other collaborative opportunities will be possible via this Sakai site. A getting started handout is available in the resources section.
Your interest and feedback regarding IPA will help determine if this tool will continue to be offered throughout the University.
Getting Started
If you have questions regarding getting started with this software send email to oirt@rutgers.edu or contact Ingenuity at Support@ingenuity.com
LIVE WEBINAR TRAINING - Sign up for FREE, LIVE webinar training every Thursday at http://www.ingenuity.com/products/training.html.
INGENUITY LIBRARY - View videos of past workshops available from the Ingenuity website library at: http://www.ingenuity.com/library/index.html. While you are there, browse the whitepapers, for example: Comparing Functions and Pathways Affected by the COX-2 Inhibitors Celebrex and Vioxx: Search and Explore in IPA http://www.ingenuity.com/library/pdf/wp_celebrex-vioxx_search_and_explore.pdf.